Dr. Joe Gerald’s Weekly AZ COVID Epidemiology Summary

Dr. Gerald just finished this week’s epidemiology update for AZ. Below is a summary- and here’s the full report.

  • The previously observed bifurcation in Arizona’s Covid-19 outbreak between those aged 15 – 24 years and everyone else has now converged into a single trend marked by slowly increasing viral transmission among all age groups.

  • Community-driven viral transmission is now equivalent to that seen during the last week of May (4,800 weekly cases) when Arizona was only 4 weeks away from its summer peak (27,800 weekly cases).

  • Mask-wearing ordinances will be needed for the foreseeable future to mitigate the spread of Covid-19.

  • Additional measures are now needed to address “quarantine fatigue” before the viral respiratory season which is fast approaching. 

  • Recent increases in Covid-related hospital utilization are unlikely to be attributable to hospital reporting compliance. Instead, rising occupancy is almost certainly due to increasing transmission among vulnerable groups.

  • While adequate excess capacity remains available in ward and ICU beds for the near future, the safety margin is now declining and will continue to do so for the foreseeable future.

  • While current Covid-19 test capacity is adequate as evidenced by quick turn-around for PCR results and a PCR test positivity of 5 – 6%, test positivity for traditional PCR testing is now slowly trending up along with new case rates.

  • Covid-19 mortality continues to decline; however, this trend is likely to halt or reverse by the end of the month if current trends continue unabated.

  • If current trends are not reversed, Arizona is on track to experience a major resurgence during the Thanksgiving – Christmas – New Year holidays.

CDC Updates COVID-19 Transmission Guidelines to Include Airborne Spread

CDC has updated its webpage on how COVID-19 spreads to include that the virus can, under certain conditions, spread through airborne transmission of small droplets and particles to infect others more than six feet away. Also provided is a brief on SARS-CoV-2 and airborne transmission.

This makes perfect sense. The fact that we see these large bursts of cases and super-spreading events suggests that this is indeed aerosol spread in addition to droplet. BTW- droplets are larger particles from a few to many microns in size while aerosols are much smaller- like just a micron or so. Aerosols can spread across much larger distances than droplets.

FDA Issues Guidance on Emergency Use Authorization of the SARS CoV2 Vaccines

Last week the FDA issued guidance to vaccine manufacturers providing new criteria for requesting Emergency Use Authorization for their SARS CoV2 vaccines. The new guidance makes it clear that the FDA wants to see 2 full months of Phase III clinical trial data before they will consider an EUA application. This is good in my opinion.

The White House had earlier blocked the FDA from releasing this decision. The New York Times reported that chief of staff Mark Meadows questioned the need for 2 months of safety data and suggested that FDA Commissioner was overly influenced by the agency’s career scientists.

Fortunately, the FDA prevailed. We need to make sure that the public has full confidence that the vaccines are following a tried and true process to ensure that they are both safe and effective if we’re going to get enough folks to voluntarily get the vaccines when they become available. Making sure that adequate Phase III data are collected and adequately analyzed will be critical.

FDA to Hold Vaccines Advisory Committee Meeting

Comments currently being accepted

The Center for Biologics Evaluation and Research’s Vaccines Advisory Committee will meet on October 22 10:00 AM – 5:00 PM ET to discuss the development, authorization, and licensure of vaccines to prevent COVID-19. The meeting will be held at this website. Registration isn’t required.

Public comments can be submitted through October 14. I submitted comments urging the Committee to ensure that no shortcuts are taken with the approval process for the SARS CoV2 vaccines. The stakes are too high. The only way out of this pandemic is to make sure that the public has full confidence that the vaccines are both safe and effective. The best way to make that happen is to make sure the FDA requires the vaccine manufacturers to follow tried and true standardized approval processes.

Agenda
The meeting presentations will be heard, viewed, captioned, and recorded through an online teleconferencing platform.  No specific application will be discussed at this meeting.

Meeting Materials
FDA intends to make background material available to the public no later than 2 business days before the meeting. If FDA is unable to post the background material on its website prior to the meeting, any background material will be made publicly available at the time of the advisory committee meeting, and additional materials will be posted on FDA’s website after the meeting.

Materials for this meeting will be available at the Vaccines and Related Biological Products Advisory Committee meetings main page.

The meeting will include slide presentations with audio components to allow the presentation of materials in a manner that most closely resembles an in-person advisory committee meeting.

Public Participation Information
Interested persons may present data, information, or views, orally or in writing, on issues pending before the committee.

FDA is establishing a docket for public comment on this meeting. The docket number is FDA-2020-N-1898. The docket will close on October 15, 2020.

Electronic Submissions
Submit electronic comments in the following way:

Dr. Gerald’s Weekly Epidemiology Report

Here is Dr. Gerald’s COVID-19 Disease Outbreak Outlook (published today). Below is the narrative summary- but as usual- much more detail is available in the full report.

“While cases on university campuses continue to decline, broader trends in the community continue to slowly worsen. Test positivity for traditional PCR, saliva and antigen testing have converged around 4 – 6%.  

There is a major correction this week with regard to the IHME metric reporting adherence to face mask recommendations. The data being reported on the IHME website seems too inconsistent to be valid. So, I do not think it is a good measure of Arizonan’s adherence. Overall, we remain in a relatively good spot but complacency is a concern moving forward into our traditional viral respiratory season.

I made a few tweaks to the Appendix data to try to improve readability of the most current data, but not sure I am happy with the changes. If someone has different suggestions, please let me know.”

Journal Article of the Week

Trends in COVID-19 Incidence After Implementation of Mitigation Measures – Arizona, January 22 – August 7, 2020  Early Release / October 6, 2020 / 69

The CDC released this new Morbidity and Mortality Weekly Report Tuesday that dives into the details of the Arizona experience with the pandemic this summer. It’s great that the folks at the ADHS put together this MMWR because it builds the evidence base for what kinds of interventions are effective at slowing the spread of COVID-19.

The piece discusses the fact that the average COVID-19 cases increased more than 150% between June 1 and June 15 following the end of the Stay at Home Order in mid-May. The report documents the fact that after face covering mandates were put in place and bars and nightclubs were shut in late June, the cases stabilized (July 3 and July 12) and daily new cases declined by 75% between July 13 and August 7.

Again, it’s great that the agency published this work because it builds the evidence base and can now serve to help other states (and even countries) as they think through interventions.

But it’s also important to tell the story the way it really happened.

For example, the MMWR write up states that… “Updated guidance from state officials provided local governments the authority to implement mask policies (June 17) and enforcement measures tailored to local public health needs“.  The reality is that Executive Order 2020-36 Provision #7 prohibited local jurisdictions from implementing face covering ordinances or other mitigating measures stronger than the Governor’s orders.

Following intensive lobbying from local officials Executive Order 2020-40 (June 17) finally removed the prohibition against face mask ordinances (although not other measures). It was not updated guidance from state officials that prompted local jurisdictions to implement face covering ordinances, it was a result of rescinding an Executive Order that had been prohibiting county and state governments from implementing this evidence-based intervention.

The report further states that… “Before June 17, mask wearing had not been widely mandated or enforced.” This statement is true but misleading. In fact, local or county mask wearing mandates had been specifically forbidden by the governor’s executive orders prior to June 17, so of course mask wearing had not been widely mandated or enforced.

Further, the report neglects to mention a highlight of the epidemic in Arizona, the fact that the state authorized Crisis Standards of Care in July because the hospital system had reached saturation.

Editorial note: You might be wondering why I’m making such a big deal about the way that this MMWR is wordsmithed with respect to the face coverings. Quite simply, it’s because courageous elected officials in county and local government across the state had stridently asked the Governor and health director for their authority back and then immediately implemented face covering ordinances as soon as the Governor’s restriction was rescinded. Many of those officials faced backlash from elements of their electorate for that decision.

The MMWR piece implies that counties and cities implemented face covering requirements simply because of a change in guidance. This is misleading. As we look towards managing the pandemic through the crucial winter months ahead, it is important that we understand the actual dynamics of implementing such a public health intervention, beyond what may be stated in a publication such as the MMWR. Unfortunately, it seems that much about our pandemic response has become political. This is an example of how that politics at first prohibited local response, and how politics was then used to lift the restriction and allow local officials to do the right thing.

Local jurisdictions need the flexibility to continue to impose mask mandates, and other mitigation measures, depending upon local circumstances.  For example, had the Governor not pre-empted local control of such matters, some local jurisdictions would not have waited so long to impose mask mandates. This would have decreased the peak of wave of infection, which has an impact on the number of cases occurring even months later.  Some jurisdictions might also choose other measures.  For example, prohibiting indoor bars and nightclubs in certain areas (such as adjacent to college campuses) which would limit the number of super-spreading events that continue to drive the epidemic.  

We will likely experience another surge in cases during the coming winter months.  The more we can limit this through modest mitigation measures such as mask mandates, the more we will be able to allow most aspects of the economy to remain open and viable.  If we don’t moderate the coming surge, we risk being forced into another partial lock-down, with perhaps even worse economic outcomes than we’ve already felt.

Lots of Rapid Antigen Tests on the Way

Last week the federal government notified states of a plan to distribute Abbott BinaxNOW antigen rapid test kits. Arizona’s allocation is about 2 million. They’re promoted as “point of care” rapid test kits. The kit works by testing a sample collected in the nose and placed into the kit. The test can identify the antigen (unique proteins) on the coat of the SARS CoV2 virus in about 15-20 minutes.

Facilities that have a CLIA certificate of waiver can implement the test, though they do not need to be CLIA-certified laboratories. There are a couple of different routes on how this can be achieved, including applying for a waiver or being associated with a CLIA-certified or waived lab.

School nurses or school employees who have been trained can administer the test, but they’d need to be either associated with a CLIA lab authorized for moderate complexity or get a waiver.  CLIA waiver certificates are easy to get these days and approval lies within the ADHS Public Health Laboratory, so presumably the kits will be used in the field mostly under CLIA waivers. 

These rapid tests have a real opportunity to improve our response. Because results are available so quickly, it gives facilities immediate information that can inform decisions. For example, the tests could be used to screen visitors and staff at assisted living and skilled nursing facilities. Schools may be able to use it to screen students quickly and make decisions about whether to send kids home etc.

A welcome development indeed.

National Academies of Medicine Release Vaccine Prioritization Recommendations

Among the most important policy decisions that need to be made in the coming weeks is how to prioritize the allocation of the early doses of vaccine. With the clinical trials showing promising results and manufacturers of several vaccines already in production (even though they are still only in Phase III Trials), it’s time to start planning how to distribute the likely vaccine(s).

Immunizing the U.S. population to prevent COVID will probably be the largest vaccination campaign ever undertaken.  A successful and equitable vaccination plan will require participation by county health departments, community health centers, healthcare providers of all kinds, emergency managers and private & nonprofit sector partners.

How should the early doses of vaccine be allocated? Fortunately the National Academies of Medicine assembled an all-star group of professionals to come up with a proposed prioritization plan that considers evidence, ethics and health disparities. It’s called the Committee on Equitable Allocation of Vaccine for the Novel Coronavirus.

They released their final report this week, entitled Framework for Equitable Allocation of COVID-19 Vaccine.  In addition to sharing an updated framework for equitable allocation of a COVID-19 vaccine, the final report includes community engagement strategies, risk communication approaches, methods to promote vaccine acceptance, and global considerations.

National Academy Plan for the equitable allocation of vaccine report was commissioned by the NIH and CDC. It’s a long document, but here’s a snapshot of the recommendations Phase 1 populations include:

  • 1a: Front-line healthcare workers (including care home workers, hospitals, home health)

  • 1a: Emergency services workers

  • 1b: Older adults in crowded settings

  • 1b: Persons of all ages w/co-morbid conditions & significantly increased risk

Chapter 3, Page 20 gives an overview of priority populations in all 4 Phases along with a detailed rational for the various selections.

This is a well thought-through document that is objective and non-partisan. Hopefully the federal, state and county governments will loom to this landmark report as they develop the SARS CoV2 vaccination plans.